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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838761.1_cds_XP_016507075.1_20236
CDS Infomation

[gene=LOC107824782] [db_xref=GeneID:107824782] [protein=casein kinase I-like] [protein_id=XP_016507075.1] [location=join(10037..10354,11547..11675,11800..11873,11959..12028,12880..12935,13773..13844,14026..14120,14200..14266,14345..14474,14582..14800,14886..15022,15564..15738,15827..15917,16943..17100,18471..18659,19192..19251)] [gbkey=CDS]
Sequence

ATGCCGGAGTTGCGGAGTGGGGTTGTACGTAAGCGCGGTGGAGCTCAAGTAGCAGCGGCG
AAAAAGAAAAGAGGCGGCGGTGGTGTTGGTGGTCGGAGTTATATTAAGACTCGGGCTGCG
AAGGCCAAAGCAGCAGCAGCAGAAGCTAAAAAGGTGGTTGAGGTGAAGGAGAAGGAGAAG
GAGAGAGTAGAGGTAGAAGAAGTTGAGGAGGAAGAGGAAAAGATGGGGGATGAGAGTGGT
GGTTTGAGTGCTAATAATAATAACAATAATAAAGCGACTGCACAAGAAGATGAGAACGCT
AATCTTTTTCCTGAACAGGTGCAAGTAGGAGGATCACCCCTTTATAAGGTTGAAAGGAAG
TTAGGTAAAGGTGGTTTTGGACAGGTGTTTTTGGGTCGCCGTCTTACTGGCGGGAATGAG
CGTGGTAACGGTCCCTTGGCTATGGAGGTTGCGCTGAAGTTTGAGCATAGAAATAGCAAA
GGCTGTAGCTATGGTCCTCCGTATGAGTGGCAAGTTTACAATACTCTTGGTGGCAGCCAT
GGAGTGCCCAGAGTGCATTATAAAGGAAGGGCAGGAGACTATTATGTTATGGTTATGGAC
ATGCTAGGGCCTAGTTTATGGGATGTATGGAATTCCTCTGGACAATCAATGTCTGCAGAA
ATGGTGGCCTGTATTGCAGTTGAGTCTTTGTCAATTTTGGAAAAGCTGCACGCAAAAGGA
TACGTGCACGGAGACGTAAAGCCAGAAAACTTTTTACTTGGCCAGCCATCAACGCCGCAA
GAGAAGAAGTTGTTCCTTGTTGACTTGGGACTGGCCACAAAGTGGAGAGACACTTCAAAA
GGGCAGCACGTCGGATATGATCAGCGTCCTGACACATTCAGAGGGACTGTCCGGTATGCA
AGTGCGCATGCTCACTTGGGAAGGACTGCCAGTAGAAGAGATGACCTGGAATCACTTGCA
TACACACTAATTTTTCTTCACAGAGGGAGGCTGCCATGGCAGGGTTATCAGGGTGATAAC
AAATCATTTCTTGTCTGCAAAAAAAAGATGGCAACATCTCCGGAGATGCTGTGTTGCTTC
TGCCCTGCACCTTTTAGAGAATTTCTTGATACAGTAATTAACCTGAAATTTGATGAAGAA
CCAAAATATTCAAAGTTAATCTCTCTATTTGGGAGCTTGCTTGGAGCTGATCCTGCTATA
AGACCAATCAACACAGATGGTGCCCAAAAGGTTATCCAGGTCGGCCAAAAGCGGGGGAGG
CTGACTTTAAATGAGGAAGAAGAGCAGCCTCAGAAGAAGGTTCGCATGGGAGTTCCTGCG
ACACAATGGATATCAATTTACAATGCCAGAAAGCCTATGAAACAGAGGTACCATTATAAT
GTAGCAGACCAAAGATTGGCACAACACGTGGAGAAAGGGTCTGTGGATGGTTTGTCTATA
AGTTGTGTAGCATCGTGTTCCAGCTTATGGGCTATTATCATGGATGCTGGAACGAACTTC
ACCAGCCAAGTTTATGAGCTGTCGCCTTTCTTCTTGCACAAGGAGTGGATCATGGAGCAG
TGGGAGAAGAACTATTATATTAGCTCTCTTGCAGGTGCCACCAATGGAAGCTCGTTAGTA
GTAATGTCAAAAGGCACACAGTTCACTCAACAGTCTTATAAAGTGAGCGAGTCGTTTCCC
TTTAAGTGGATAAGCAAGAAATGGAAAGAAGGGTTCCACGTGACCTCCATGGCAACTGCT
GGCTCTAGGTGGGCTGTTGTTATGTCACGCAATTCAGGCTTCAGTGACCAGGTGGTAGAG
CTCGATTTTCTTTATCCCAGTGAAGGCATTCACAAGCGGTGGGATAATGGTTATCGTATT
ACTGCAACAGCTGCTACGGCAGACCAAGCTGCCCTTATCCTGAGTGTGCCTCGCCGAAGA
CCTGGTGATGAGACTCAGGAAACTCTGCGAACATCTCAGTTTCCCAGCACACATGTCAAG
GAAAAGTGGGGAAAGAATCTCTATCTTTCTTGTCTATGCTATGGGCGCACTGTATCTTGA

Peptide Sequence

PEP ID

XP_016507075.1
PEP Infomation

PREDICTED: casein kinase I-like [Nicotiana tabacum]
Sequence

MPELRSGVVRKRGGAQVAAAKKKRGGGGVGGRSYIKTRAAKAKAAAAEAKKVVEVKEKEK
ERVEVEEVEEEEEKMGDESGGLSANNNNNNKATAQEDENANLFPEQVQVGGSPLYKVERK
LGKGGFGQVFLGRRLTGGNERGNGPLAMEVALKFEHRNSKGCSYGPPYEWQVYNTLGGSH
GVPRVHYKGRAGDYYVMVMDMLGPSLWDVWNSSGQSMSAEMVACIAVESLSILEKLHAKG
YVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDTSKGQHVGYDQRPDTFRGTVRYA
SAHAHLGRTASRRDDLESLAYTLIFLHRGRLPWQGYQGDNKSFLVCKKKMATSPEMLCCF
CPAPFREFLDTVINLKFDEEPKYSKLISLFGSLLGADPAIRPINTDGAQKVIQVGQKRGR
LTLNEEEEQPQKKVRMGVPATQWISIYNARKPMKQRYHYNVADQRLAQHVEKGSVDGLSI
SCVASCSSLWAIIMDAGTNFTSQVYELSPFFLHKEWIMEQWEKNYYISSLAGATNGSSLV
VMSKGTQFTQQSYKVSESFPFKWISKKWKEGFHVTSMATAGSRWAVVMSRNSGFSDQVVE
LDFLYPSEGIHKRWDNGYRITATAATADQAALILSVPRRRPGDETQETLRTSQFPSTHVK
EKWGKNLYLSCLCYGRTVS

Transcript Sequence

Gene sequence data has not been registered.